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ATO disputes and tax controversy

Audits, reviews, objections, penalties, settlements and the decisions you have to make before the amendment period closes.

A tax dispute is won or lost long before anyone files anything. It is won in what gets said in the first response to the ATO, what evidence is assembled while it is still available and whether the position taken at the audit stage is one you can still run two years later on objection.

We are brought in at every stage: sometimes at the first risk-review letter, more often once a position paper has landed and the numbers have become real. The work is the same either way: establish what the Commissioner actually has to prove, work out what you can prove and take the shortest defensible path to a resolution.

What we do

  • ATO risk reviews, audits and information requests, including Next 5,000 and private group programs
  • Position papers and reasons for decision: responding on the technical merits and on the evidence
  • Objections against assessments, amended assessments and private ruling decisions
  • Default and estimated assessments and discharging the burden of proof under Part IVC
  • Shortfall penalties: reasonable care, reasonably arguable position, recklessness and intentional disregard
  • Remission of shortfall interest charge and general interest charge
  • Voluntary disclosures, including scoping what to disclose and when
  • Settlement strategy, deeds of settlement and negotiating with ATO decision-makers
  • Review applications to the Administrative Review Tribunal and appeals to the Federal Court
  • Debt matters: payment arrangements, garnishee notices, director penalty notices and release on serious hardship grounds under Division 340

Our approach

Scope first. Before any substantive response, we establish what is actually in issue, what powers the ATO is exercising and what the realistic range of outcomes is. That determines whether the matter should be fought, disclosed or settled.

Evidence before argument. Technical arguments are cheap. Evidence is not. We identify early what has to be proved and whether the material to prove it exists, because that dictates strategy.

Phased scopes. Disputes run over long periods. We scope work in phases with a fee estimate for each phase so the cost is visible before it is incurred.

How long do I have to object?

It depends on what you are objecting to. For an original assessment, the period is generally two years from the date the notice is given for most individuals and small business entities and four years for others. For an amended assessment it is the later of 60 days from the amended assessment and the balance of the original period, confined to the amended particulars. A late objection can be lodged with a request for an extension of time. Treat the date on the notice as a hard deadline and work backwards.

Can penalties and interest be reduced after an assessment issues?

Yes. Shortfall penalty can be remitted in whole or part and shortfall interest charge and general interest charge can be remitted separately on separate tests. Remission is a discretion, so the case has to be made, usually by showing what care was actually taken at the time and what evidence supports it.

Recent decisions on ATO disputes

23 September 2026
Disputes

One email, seven chances

Watson (No 2) [2026] FCA 1341

An email withdrew a taxpayer's Tribunal case. After seven listings over 12 months, missing medical evidence, not the email, ended it.

21 August 2026
Deductions

Being better at the job is not the job

Hartley [2026] ARTA 1590

The Tribunal denies an employee's home lab, storage and subscription claims. The reasons apply Hatchett and never test Finn.

20 August 2026
Disputes

The deed he signed anyway

Egan [2026] FCA 1104

The Federal Court refuses to vary a settlement deed with the Commonwealth over a 2003 private ruling the Commissioner later determined was incorrect.

12 August 2026
Disputes

A rehearing, not a result

Hasan [2026] FCA 1072

The Federal Court sets aside a Tribunal decision on childcare fees said to belong to the educators. The win may change little on remittal.

4 August 2026
Disputes

The folder nobody opened

BHZD [2026] ARTA 1376

A Tribunal decision on the safe harbour, what has to be handed to a new agent and a penalty that turned on an unopened folder.

31 July 2026
Tax agents

Ninety days, no hearing

The Bill before Parliament would let the Board suspend a tax agent for 90 days without a hearing. It lands hardest on sole practitioners.

Show all 36 notes
8 July 2026
Disputes

The casino knew more than the return

Cai [2026] ARTA 1224

A Tribunal decision where $42,000 of declared income met half a million dollars of casino buy-ins, and the friends-lent-it defence had no records.

7 July 2026
Income tax

Conducting the orchestra

Larmar [2026] FCA 826

The Federal Court assesses 30 years of syndicate fees to the accountant personally, with the bank documents doing much of the damage.

27 June 2026
Deductions

The ball gown was never deductible

WXGY [2026] ARTA 1129

A Tribunal decision allowing about $48,700 of $143,788 claimed by a real estate agent and upholding a 50 per cent penalty for re-running audited claims.

23 June 2026
Disputes

The Crocodile Dundee royalty claim

Bouvet [2026] ARTA 1075

A Tribunal decision on a $19.6 million withholding credit claim, what sits outside an assessment and when an application has no reasonable prospects.

21 June 2026
Disputes

Hardship, measured line by line

Prasser [2026] ARTA 1053

A Tribunal decision releasing a $148,582 tax debt for serious hardship, and how the household budget is tested line by line.

2 June 2026
Tax agents

Thirty days to report a breach

Registered practitioners must report significant Code breaches, their own and other practitioners’, within 30 days. What counts as significant and what is coming.

28 May 2026
Disputes

The gifts that arrived monthly for eleven years

Cheung [2026] FCAFC 75

The Full Federal Court on why $30 million in regular payments from a family business were income, and why demeanour cannot outweigh the documents.

26 May 2026
Disputes

Picking at the assessment is not proof

Fan [2026] ARTA 875

A Tribunal decision on default assessments where the Commissioner filed a mess and the taxpayer still lost, because the burden never moved.

1 May 2026
Tax agents

Truckies Tax Accountants, permanently restrained

Hinckfuss (No 2) [2026] FCA 529

The Federal Court permanently restrains a repeat unregistered preparer, and what a failure to file a concise statement in response means on default judgment.

11 April 2026
Deductions

Self-education without the nexus

Bhattacharya [2026] ARTA 538

A Tribunal decision disallowing $31,541 of online entrepreneur courses claimed by an enterprise IT manager, on a textbook application of Hatchett.

8 April 2026
Disputes

The DOCA that stopped paying

McCabe [2026] FCA 395

The Federal Court terminates a pooled DOCA after the funding director defaulted and left the country, clearing the way for liquidators to investigate.

2 April 2026
Disputes

A counterfactual needs a paper trail

Collie [2026] ARTA 328

A Tribunal decision on the evidence needed to show there was no tax benefit. Claimed funds for living expenses fell short without bank records or evidence of outgoings.

April 2026
Deductions

Home office occupancy expenses after Hall

Hall [2026] FCAFC 43

The Full Federal Court on why employees cannot deduct occupancy expenses for a home office and the essential character test.

30 March 2026
Disputes

What actually happens in an ATO review or audit

How the ATO compliance process works, the difference between a review and an audit and the practical lessons for advisers. Published note.

23 March 2026
Disputes

We lost, but nothing changes

PepsiCo [2025] HCA 30

The ATO's Decision Impact Statement on PepsiCo reads less like guidance and more like litigation strategy. What the High Court actually decided.

19 March 2026
Disputes

Handing over your TFN is not a defence

Verma [2026] ARTA 343

A taxi driver gave his details to an acquaintance who lodged false BAS. The Tribunal upheld the 75 per cent penalty and the uplift.

14 March 2026
Deductions

The logbook written after the fact

Afshari [2026] ARTA 159

An engineer claimed $61,286 in work-related deductions. Reconstructed logbooks, a calendar built from memory and a 70 per cent utilities claim all failed.

13 March 2026
Disputes

Director penalty notices and the evidence trap

Wynyard [2026] NSWSC 175

A NSW decision on director penalty notices, service and why the evidentiary position matters more than the argument.

6 March 2026
Disputes

Penalty remission built on the person

Yuen [2026] ARTA 279

A rare Tribunal decision remitting sales suppression and shortfall penalties under s 298-20 and what actually tipped the balance.

5 March 2026
Deductions

$19 a day and seven failed grounds

Shaw [2026] FCA 197

The Federal Court rejects the Commissioner's approach to travel meal deductions claimed within the reasonable amount, on every ground argued.

4 March 2026
Disputes

Winning the appeal was the easy part

Hicks (No 2) [2026] FCAFC 14

The Full Court on why winning taxpayers still failed to get indemnity costs and how a formal offer should be built from the start.

3 March 2026
CGT

Technically correct, deeply unfair

Lewis [2026] ARTA 256

A Tribunal decision affirming CGT on shares sold to keep a collapsing business alive and where the system leaves no discretion.

3 March 2026
Disputes

The ATO’s general interest charge problem, diagnosed

Tax Ombudsman report, March 2026

What the Tax Ombudsman's review of general interest charge remission found and what it means for practitioners. Published note.

24 February 2026
Disputes

A practice statement is not the law

Yadav [2026] FCA 140

The Federal Court holds the Commissioner is not required to follow an internal practice statement when forming an opinion of fraud or evasion.

24 February 2026
Tax agents

The renewal form is not a formality

Kumar [2026] ARTA 232

A tax agent answered No to the good fame question with an adverse tribunal finding behind him. Sixty nine breaches later, no stay of the termination.

23 February 2026
Disputes

Told the bank one thing, told the ATO another

Endycott [2026] ARTA 214

A decision on default assessments, inconsistent accounts of the same funds and what a taxpayer has to prove.

21 February 2026
FBT

Born to race, taxed to drive

MXSN [2026] ARTA 186

A Tribunal decision on car fringe benefits where the logbooks were fabricated after the audit began and an expert argued the Ferrari was not a passenger vehicle.

18 February 2026
Deductions

Service fees on a mistaken assumption

S.N.A Group [2026] FCAFC 10

The Full Federal Court denies deductions for intragroup service fees paid after the written agreements had quietly expired.

13 February 2026
Disputes

A deed does not bind the Commissioner

Ziegler [2025] FCAFC 168

The Full Federal Court reaffirms that a settlement deed cannot constrain the Commissioner's statutory powers of assessment.

11 February 2026
Deductions

Calling it interest did not make it interest

Charles Apartments [2025] FCAFC 180

The Full Federal Court denies a $1.87 million interest deduction where the payment discharged another company's debt and protected the capital position.

Have a matter you want a straight answer on?

Most engagements start with a short conversation about the issue and the exposure.

arda@nortonquaytaxlaw.com.au